Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939856.1_cds_XP_016484280.1_75311
CDS Infomation

[gene=LOC107804857] [db_xref=GeneID:107804857] [protein=galactan beta-1,4-galactosyltransferase GALS3-like] [protein_id=XP_016484280.1] [location=complement(join(82729..83074,84931..86081))] [gbkey=CDS]
Sequence

ATGACAAAGGAAAAAGAGAGAAAAATGTTTGTTGGAGTTGTTTGGAATTGTGCAGCTGAA
CTCAAACTTCTCCTTACTGCTATTCTTTTCCTCTGTTCACTTATCACCATTCTTCAATTC
ATGCCCTCTCGTTTTTCTTTCACTCCTTCAAATTTTAGCACTTGTCTTTCTACTCCTATA
TCCCCTTCTACCTCTTTTATTGATTCTATCTCCGCCATAAACGCCACCTCTATTCCGCCG
CCGCCGCCGTTAACGAAAAACGACGAGATTCTCGAAAATGGAGTTATTAAGCGCGCTTTC
AATCCATTCGGTTCAGCTGCTTACAATTTTATACTTATGTCTGCTTACAGAGGTGGACTT
AACACTTTCGCCGTTATGGGTTTAGCTTCAAAACCTCTCCATGTGTACGGAAAACCCAGT
TATCAGTGTGAATGGATCCCGAACGACGACAAGCTAAAATCCATTACTGTAAATGGTAGC
AAAATCCTACCCGATTGGGGATACGGTAGAGTTTATACTGTTTTAGTTATCAATTGCACT
TTCCCTATCCCAGTTGGTACTGAAAATGGAGGAAAACTCGTAATTCATGCCGCTACTAAC
GGCGGAGGCGACGCTAAATTCAACACCGTCGACACTTTTGTAGGGTTAACTGAAACAGAA
CAGGATTTCATTAATTTCACTGCAGAATTCAATAAACCGCCAAAGTATGATTTCTTCTAC
TGTGGATCATCTTTATATGGGAATTTAAGTCCACAAAGAGTAAGAGAATGGTTAGCTTTT
CACGTTAGATTATTCGGAGAGAAATCTCATTTCGTAATTCATGATGCTGGAGGTATACAC
GAAGGAGTAATGGCGGTTTTAAAGCCATGGATGGAGAAAGGATTTGTTACATTACAAGAC
ATTCGGGACCAAGAAAGATTTGATGGATATTATCATAATCAGTTTTTGATTGTGAATGAT
TGTTTACATAGGTATAGATTTCAAGCTAAATGGATGTTCTTTTTTGATGTGGATGAGTTC
ATTTTTGTGCCTAAGAAGAGTACTATTAAAACTGTGGTGGATTCGTTGTCGGATTTTACA
CAATTCACCATTGAGCAGATGCCTATGTCCAACAAGCTCTGTCTTGAAGAGGACCGCGGT
AAATCTTACAGAAAATGGGGGTTTGAGAAGCTAGTGTACAAGGATATCAAGAGAGGAATA
AGGAGGGATAGAAAATACGCGGTGCAACCGCGCAATGTGATAGCCACGGGCGTGCATATG
TCACAGAACATAGTTGGCAAGACAACCCACAAAACAGAAGGGCTCATCAAGTATTTCCAC
TATCACGGGACCATTGCAGAACGCCGCGAGCCATGTCGGCAGCTGGTCAACGCCACGGCG
ATCACCGTTGACCGAACCCCGTATGCTGTGGACACTACAATGAGGGATATTGCTGGGATT
GTTAAGAGATTTGAACTTAAGATGATTGGCCCTGTTCTACAAAGAACAAGACAATAA

Peptide Sequence

PEP ID

XP_016484280.1
PEP Infomation

PREDICTED: galactan beta-1,4-galactosyltransferase GALS3-like [Nicotiana tabacum]
Sequence

MTKEKERKMFVGVVWNCAAELKLLLTAILFLCSLITILQFMPSRFSFTPSNFSTCLSTPI
SPSTSFIDSISAINATSIPPPPPLTKNDEILENGVIKRAFNPFGSAAYNFILMSAYRGGL
NTFAVMGLASKPLHVYGKPSYQCEWIPNDDKLKSITVNGSKILPDWGYGRVYTVLVINCT
FPIPVGTENGGKLVIHAATNGGGDAKFNTVDTFVGLTETEQDFINFTAEFNKPPKYDFFY
CGSSLYGNLSPQRVREWLAFHVRLFGEKSHFVIHDAGGIHEGVMAVLKPWMEKGFVTLQD
IRDQERFDGYYHNQFLIVNDCLHRYRFQAKWMFFFDVDEFIFVPKKSTIKTVVDSLSDFT
QFTIEQMPMSNKLCLEEDRGKSYRKWGFEKLVYKDIKRGIRRDRKYAVQPRNVIATGVHM
SQNIVGKTTHKTEGLIKYFHYHGTIAERREPCRQLVNATAITVDRTPYAVDTTMRDIAGI
VKRFELKMIGPVLQRTRQ

Transcript Sequence

Gene sequence data has not been registered.